Checks if the markdown file generated is empty or not due to some pandoc related error during conversion to markdown.
Examples
article_dir <- system.file("examples/article",
package = "texor")
dir.create(your_article_folder <- file.path(tempdir(), "tempdir"))
x <- file.copy(from = article_dir, to = your_article_folder,recursive = TRUE,)
your_article_path <- paste(your_article_folder,"article",sep="/")
rmarkdown::pandoc_version()
#> [1] ‘3.1.11’
texor::include_style_file(your_article_path)
#> [1] TRUE
rebib::aggregate_bibliography(your_article_path)
#> No Bib files found !
#> Cannot aggregate bibliography as there is no BibTeX bibliography
#> No Bib files found !
#> BibTeX file does not exist
#> will parse for bibliography
#> bibtex file created
texor::convert_to_markdown(your_article_path)
#> /usr/local/bin/pandoc +RTS -K512m -RTS /private/var/folders/t_/mmhnh941511_hp2lwh383bp00000gn/T/RtmpQhQvJb/tempdir/article/RJwrapper.tex --to markdown-simple_tables-pipe_tables-fenced_code_attributes --from latex --output /private/var/folders/t_/mmhnh941511_hp2lwh383bp00000gn/T/RtmpQhQvJb/tempdir/article/RJwrapper.md -s --resource-path /private/var/folders/t_/mmhnh941511_hp2lwh383bp00000gn/T/RtmpQhQvJb/tempdir/article --lua-filter /Users/runner/work/_temp/Library/texor/issue_checker.lua --lua-filter /Users/runner/work/_temp/Library/texor/abs_filter.lua --lua-filter /Users/runner/work/_temp/Library/texor/bib_filter.lua --lua-filter /Users/runner/work/_temp/Library/texor/equation_filter.lua --lua-filter /Users/runner/work/_temp/Library/texor/image_filter.lua --lua-filter /Users/runner/work/_temp/Library/texor/sec_depth.lua --lua-filter /Users/runner/work/_temp/Library/texor/fig_code_chunk.lua --lua-filter /Users/runner/work/_temp/Library/texor/widetable_patcher.lua --lua-filter /Users/runner/work/_temp/Library/texor/R_code.lua --lua-filter /Users/runner/work/_temp/Library/texor/table_caption.lua --lua-filter /Users/runner/work/_temp/Library/texor/table_code_chunk.lua --lua-filter /Users/runner/work/_temp/Library/texor/conversion_compat_check.lua --lua-filter /Users/runner/work/_temp/Library/texor/bookdown_ref.lua --citeproc
#> Detected the following packages from article:
#> CRAN:
#> Bioconductor:
#> [1] TRUE
texor::check_markdown_file(your_article_path)
#> [1] TRUE
unlink(your_article_folder, recursive = TRUE)