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Uses pandoc along with several lua filters found at inst/extdata/filters in texor package

Usage

convert_to_native(article_dir, autonumber_eq = FALSE)

Arguments

article_dir

path to the directory which contains tex article

autonumber_eq

whether to autonumber the equations, default is FALSE

Value

creates a converted native AST file, as well as a pkg_meta.yaml file

Details

convert latex(wrapper) file to pandoc AST

Note

pandoc (along with lua interpreter) is already installed with R-studio, hence if not using R-studio you will need to install pandoc. https://pandoc.org/installing.html

Use pandoc version greater than or equal to 3.1

Examples

# Note This is a minimal example to execute this function
article_dir <- system.file("examples/article",
                 package = "texor")
dir.create(your_article_folder <- file.path(tempdir(), "tempdir"))
x <- file.copy(from = article_dir, to = your_article_folder,recursive = TRUE,)
your_article_path <- paste(your_article_folder,"article",sep="/")
rmarkdown::pandoc_version()
#> [1] ‘3.1.11’
texor::include_style_file(your_article_path)
#> [1] TRUE
rebib::aggregate_bibliography(your_article_path)
#> No Bib files found !
#> Cannot aggregate bibliography as there is no BibTeX bibliography
#> No Bib files found !
#> BibTeX file does not exist
#> will parse for bibliography
#> bibtex file created
texor::convert_to_native(your_article_path)
#> /usr/local/bin/pandoc +RTS -K512m -RTS /private/var/folders/4d/0gnh84wj53j7wyk695q0tc_80000gn/T/Rtmp8M5nnD/tempdir/article/RJwrapper.tex --to native --from latex --output /private/var/folders/4d/0gnh84wj53j7wyk695q0tc_80000gn/T/Rtmp8M5nnD/tempdir/article/RJwrapper.txt -s --resource-path /private/var/folders/4d/0gnh84wj53j7wyk695q0tc_80000gn/T/Rtmp8M5nnD/tempdir/article/RJwrapper.tex --lua-filter /Users/runner/work/_temp/Library/texor/abs_filter.lua --lua-filter /Users/runner/work/_temp/Library/texor/bib_filter.lua --lua-filter /Users/runner/work/_temp/Library/texor/image_filter.lua --lua-filter /Users/runner/work/_temp/Library/texor/R_code.lua --lua-filter /Users/runner/work/_temp/Library/texor/image_caption.lua --lua-filter /Users/runner/work/_temp/Library/texor/widetable_patcher.lua --lua-filter /Users/runner/work/_temp/Library/texor/table_caption.lua --lua-filter /Users/runner/work/_temp/Library/texor/conversion_compat_check.lua --lua-filter /Users/runner/work/_temp/Library/texor/equation_filter.lua --lua-filter /Users/runner/work/_temp/Library/texor/bookdown_ref.lua --citeproc 
#> Detected the following packages from article:
#>   CRAN: 
#>   Bioconductor: 
unlink(your_article_folder,recursive = TRUE)